Healing Your Gut: Strategies for Autoimmune Disorders

Autoimmune gastrointestinal conditions like Celiac Disease, Ulcerative Colitis, and Crohn’s Disease are more than just digestive issues. These are systemic, immune-driven conditions that originate in the gut but can have far-reaching effects on the entire body. Managing these conditions effectively requires addressing not only diet but also nutrient status, gut microbiome balance, and lifestyle habits.


My Personal Story: When My Skin Reacted to Gluten

Topical reaction to wheat exposure in celiac patient.

After my Celiac diagnosis, I became meticulous about what I ate — but I learned the hard way that food isn’t the only source of gluten exposure.

One day, I used a new face wash without checking the ingredients. Hours later, I developed a severe dermatological reaction that lasted for days and required steroid treatment.
I later found out the face wash contained wheat-derived ingredients.
Even though I hadn’t ingested gluten, topical exposure triggered an immune response.

This experience is a powerful reminder of how important it is to screen not only what we eat but also what we put on our skin, use in supplements, or come into contact with.

The Gut-Body Connection

Your gut is home to nearly 70% of your immune system and plays a critical role in regulating inflammation, absorbing nutrients, and maintaining the barrier between your body and the outside world (Furness et al., 2008).

When the gut becomes inflamed due to autoimmune conditions, it can lead to:

  • Increased intestinal permeability (“leaky gut”)
  • Nutrient malabsorption
  • Hormonal disruption
  • Skin conditions like eczema, psoriasis, or rashes
  • Chronic fatigue, mood changes, and brain fog
  • Systemic inflammation and joint pain

This is why it’s not uncommon for people with Celiac Disease, Ulcerative Colitis, or Crohn’s Disease to experience symptoms beyond digestion.


Dietary Strategies to Support Autoimmune Gut Disorders

1. Gluten-Free Diet (Celiac Disease)
For those with Celiac Disease, strict, lifelong adherence to a gluten-free diet is the cornerstone of treatment. Even trace amounts of gluten can trigger an autoimmune response leading to intestinal damage (Rubio-Tapia et al., 2013).

2. Low-FODMAP Diet (Short-term use)
The Low-FODMAP diet has been shown to significantly reduce symptoms in people with IBS and has also demonstrated benefit in those with SIBO, Crohn’s, and Ulcerative Colitis.
However, it’s crucial to note that this diet is not meant to be used long-term. Studies suggest it should be followed for no longer than 6–12 weeks due to the risk of reducing beneficial gut bacteria (Staudacher et al., 2017).

3. Anti-Inflammatory Foods
Increasing consumption of foods rich in omega-3 fatty acids, polyphenols, antioxidants, and fiber can help lower inflammation and support microbiome diversity.
Examples include:

  • Wild-caught fatty fish (salmon, sardines)
  • Berries
  • Leafy greens
  • Olive oil
  • Fermented foods (if tolerated)

4. Nutrient-Dense Diet
Due to malabsorption risks, patients with autoimmune gut conditions are at higher risk for deficiencies in:

  • Iron
  • Vitamin B12
  • Folate
  • Vitamin D
  • Magnesium
  • Zinc

Testing and targeted supplementation are essential for addressing these deficiencies.


Targeted Supplement Support

Supplements are not a replacement for foundational diet and lifestyle work but can play a key supportive role when used appropriately and guided by clinical evidence:

Digestive Enzymes

Support nutrient breakdown and absorption, especially in cases of villous atrophy (Celiac Disease) or pancreatic insufficiency.
Reference: Martinsen et al., 2015

L-Glutamine

An amino acid that supports gut lining integrity and reduces intestinal permeability.
Reference: Wang et al., 2015

Omega-3 Fatty Acids (EPA/DHA)

Shown to reduce inflammatory markers in IBD patients.
Reference: Turner et al., 2011

Curcumin

Anti-inflammatory and antioxidant properties; studies show it can improve symptoms in Ulcerative Colitis patients.
Reference: Hanai et al., 2006

Vitamin D, B12, Iron, Folate, Zinc

Common deficiencies in autoimmune gut conditions; supplementation should be based on lab results.
Reference: Vagianos et al., 2007

Probiotics & Prebiotic Fibers

Certain strains such as Saccharomyces boulardii, Lactobacillus rhamnosus GG, and Bifidobacterium infantis have demonstrated benefit in managing gut inflammation and dysbiosis (Derwa et al., 2017).
Timing matters: These are introduced after the antimicrobial phase, once inflammation has been reduced.


The Role of Lifestyle in Managing Autoimmune Gut Conditions

Chronic stress, lack of sleep, and sedentary lifestyle can all worsen autoimmune symptoms.

Stress Reduction:
Stress increases intestinal permeability and alters gut microbiota composition (Chrousos, 2009). Techniques like meditation, yoga, and deep breathing exercises are helpful.

Regular Movement:
Exercise has been shown to promote microbiome diversity and reduce systemic inflammation (Clarke et al., 2014).

Environmental Triggers:
Topical and environmental exposures can trigger symptoms in sensitive individuals — something I personally experienced.


The Takeaway

If you’re living with Celiac Disease, Ulcerative Colitis, or Crohn’s Disease, you need more than symptom management.
You need a comprehensive strategy that includes:

✅ Personalized nutrition
✅ Strategic supplement protocols
✅ Lifestyle & stress management
✅ Awareness of environmental exposures

That’s exactly what we do inside The Sky Wellness Collective.
My protocols are evidence-based, clinically informed, and focused on sustainable gut healing — so you can reclaim your energy, digestion, and well-being.

👉 Join The Sky Wellness Collective today.
You don’t have to figure this out on your own.

References

  1. Furness JB, Kunze WA, Clerc N. Nutrient tasting and signaling mechanisms in the gut. Gastroenterology.2008;135(4):1363-1375. doi:10.1053/j.gastro.2008.05.015
  2. Rubio-Tapia A, Hill ID, Kelly CP, Calderwood AH, Murray JA. ACG Clinical Guidelines: Diagnosis and Management of Celiac Disease. Am J Gastroenterol. 2013;108(5):656-676. doi:10.1038/ajg.2013.79
  3. Staudacher HM, et al. Mechanisms and efficacy of dietary FODMAP restriction in IBS. Nat Rev Gastroenterol Hepatol. 2017;14(4):231-241. doi:10.1038/nrgastro.2016.206
  4. Martinsen TC, Bergh K, Waldum HL. Gastric juice: a barrier against infectious diseases. Basic Clin Pharmacol Toxicol. 2015;116(2):94-103. doi:10.1111/bcpt.12310
  5. Wang B, et al. Glutamine and intestinal barrier function. Amino Acids. 2015;47(10):2143-2154. doi:10.1007/s00726-014-1775-0
  6. Turner D, et al. Omega-3 fatty acids in inflammatory bowel disease: an updated systematic review and meta-analysis. J Crohns Colitis. 2011;5(2):115-123. doi:10.1016/j.crohns.2010.12.002
  7. Hanai H, et al. Curcumin maintenance therapy for ulcerative colitis: randomized, multicenter, double-blind, placebo-controlled trial. Clin Gastroenterol Hepatol. 2006;4(12):1502-1506. doi:10.1016/j.cgh.2006.07.008
  8. Vagianos K, et al. Nutritional risk assessment in Crohn’s disease. J Parenter Enteral Nutr. 2007;31(4):311-319. doi:10.1177/0148607107031004311
  9. Derwa Y, et al. Systematic review with meta-analysis: the efficacy of probiotics in the treatment of irritable bowel syndrome. Aliment Pharmacol Ther. 2017;46(2):103-116. doi:10.1111/apt.14155
  10. Chrousos GP. Stress and disorders of the stress system. Nat Rev Endocrinol. 2009;5(7):374-381. doi:10.1038/nrendo.2009.106
  11. Clarke SF, et al. Exercise and associated dietary extremes impact on gut microbial diversity. Gut.2014;63(12):1913-1920. doi:10.1136/gutjnl-2013-306541

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